isomiR Target Prediction
| isomiR-specific | GeneTitle | Shared | GeneTitle | Canonical miRNA-specific | GeneTitle |
|---|---|---|---|---|---|
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | FMR1 | fragile X mental retardation 1 | RGS4 | regulator of G-protein signaling 4 |
| LMOD1 | leiomodin 1 (smooth muscle) | SORT1 | sortilin 1 | HEG1 | HEG homolog 1 (zebrafish) |
| MECP2 | methyl CpG binding protein 2 (Rett syndrome) | NR2C2 | nuclear receptor subfamily 2, group C, member 2 | SORCS1 | sortilin-related VPS10 domain containing receptor 1 |
| PPP1R9B | protein phosphatase 1, regulatory (inhibitor) subunit 9B | PTPN12 | protein tyrosine phosphatase, non-receptor type 12 | THAP2 | THAP domain containing, apoptosis associated protein 2 |
| ABAT | 4-aminobutyrate aminotransferase | ADAM19 | ADAM metallopeptidase domain 19 (meltrin beta) | OSTM1 | osteopetrosis associated transmembrane protein 1 |
| ABHD2 | abhydrolase domain containing 2 | PRDM1 | PR domain containing 1, with ZNF domain | USP43 | ubiquitin specific peptidase 43 |
| ADAMTS14 | ADAM metallopeptidase with thrombospondin type 1 motif, 14 | JMJD2A | jumonji domain containing 2A | SLC30A8 | solute carrier family 30 (zinc transporter), member 8 |
| AQP8 | aquaporin 8 | MSRB3 | methionine sulfoxide reductase B3 | ZDHHC16 | zinc finger, DHHC-type containing 16 |
| ARC | activity-regulated cytoskeleton-associated protein | CNTNAP2 | contactin associated protein-like 2 | TRIM9 | tripartite motif-containing 9 |
| ATP2B4 | ATPase, Ca++ transporting, plasma membrane 4 | PSD3 | pleckstrin and Sec7 domain containing 3 | PARP14 | poly (ADP-ribose) polymerase family, member 14 |
| ATXN7L3 | ataxin 7-like 3 | SLC12A5 | solute carrier family 12, (potassium-chloride transporter) member 5 | UPF3B | UPF3 regulator of nonsense transcripts homolog B (yeast) |
| BCL7A | B-cell CLL/lymphoma 7A | GLDC | glycine dehydrogenase (decarboxylating) | ITPR2 | inositol 1,4,5-triphosphate receptor, type 2 |
| BZRAP1 | benzodiazapine receptor (peripheral) associated protein 1 | FBXO33 | F-box protein 33 | HTR2C | 5-hydroxytryptamine (serotonin) receptor 2C |
| C16orf5 | chromosome 16 open reading frame 5 | MEGF8 | multiple EGF-like-domains 8 | UNK | unkempt homolog (Drosophila) |
| C1orf144 | chromosome 1 open reading frame 144 | WDR32 | WD repeat domain 32 | KCNE3 | potassium voltage-gated channel, Isk-related family, member 3 |
| C20orf4 | chromosome 20 open reading frame 4 | SUPT7L | suppressor of Ty 7 (S. cerevisiae)-like | FAM53C | family with sequence similarity 53, member C |
| CCDC92 | coiled-coil domain containing 92 | INPP5B | inositol polyphosphate-5-phosphatase, 75kDa | THRA | thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) |
| CHKB | choline kinase beta | FAM160B1 | family with sequence similarity 160, member B1 | CXorf23 | chromosome X open reading frame 23 |
| CILP | cartilage intermediate layer protein, nucleotide pyrophosphohydrolase | FNDC7 | fibronectin type III domain containing 7 | LOC153364 | similar to metallo-beta-lactamase superfamily protein |
| CIT | citron (rho-interacting, serine/threonine kinase 21) | PRR12 | proline rich 12 | NRCAM | neuronal cell adhesion molecule |
| CYB561D1 | cytochrome b-561 domain containing 1 | ZC3HAV1L | zinc finger CCCH-type, antiviral 1-like | CHP | calcium binding protein P22 |
| ECE1 | endothelin converting enzyme 1 | VAV3 | vav 3 guanine nucleotide exchange factor | CUX1 | cut-like homeobox 1 |
| FCHSD2 | FCH and double SH3 domains 2 | FAM63A | family with sequence similarity 63, member A | SLC8A3 | solute carrier family 8 (sodium-calcium exchanger), member 3 |
| HLF | hepatic leukemia factor | HIF1AN | hypoxia-inducible factor 1, alpha subunit inhibitor | TMF1 | TATA element modulatory factor 1 |
| HSPB7 | heat shock 27kDa protein family, member 7 (cardiovascular) | ICA1L | islet cell autoantigen 1,69kDa-like | MYO7A | myosin VIIA |
| IKZF4 | IKAROS family zinc finger 4 (Eos) | LPAR1 | lysophosphatidic acid receptor 1 | ATXN1 | ataxin 1 |
| IL1R1 | interleukin 1 receptor, type I | SNTB2 | syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) | SNX24 | sorting nexin 24 |
| KCNC1 | potassium voltage-gated channel, Shaw-related subfamily, member 1 | RHOBTB1 | Rho-related BTB domain containing 1 | ZNRF1 | zinc and ring finger 1 |
| KIF17 | kinesin family member 17 | POLD4 | polymerase (DNA-directed), delta 4 | PPP1CA | protein phosphatase 1, catalytic subunit, alpha isoform |
| KIF3B | kinesin family member 3B | MEGF11 | multiple EGF-like-domains 11 | CPEB4 | cytoplasmic polyadenylation element binding protein 4 |
| LPAR5 | lysophosphatidic acid receptor 5 | ZBTB6 | zinc finger and BTB domain containing 6 | PLEKHB2 | pleckstrin homology domain containing, family B (evectins) member 2 |
| MAPK8IP3 | mitogen-activated protein kinase 8 interacting protein 3 | SATB2 | SATB homeobox 2 | CYFIP2 | cytoplasmic FMR1 interacting protein 2 |
| MAPT | microtubule-associated protein tau | AFF3 | AF4/FMR2 family, member 3 | EIF4EBP1 | eukaryotic translation initiation factor 4E binding protein 1 |
| MCC | mutated in colorectal cancers | PPP5C | protein phosphatase 5, catalytic subunit | ATF7 | activating transcription factor 7 |
| MOBKL1A | MOB1, Mps One Binder kinase activator-like 1A (yeast) | NIN | ninein (GSK3B interacting protein) | HRNBP3 | hexaribonucleotide binding protein 3 |
| MTA2 | metastasis associated 1 family, member 2 | CACNA1E | calcium channel, voltage-dependent, R type, alpha 1E subunit | USP34 | ubiquitin specific peptidase 34 |
| MTMR8 | myotubularin related protein 8 | PTGFRN | prostaglandin F2 receptor negative regulator | USP31 | ubiquitin specific peptidase 31 |
| NAB2 | NGFI-A binding protein 2 (EGR1 binding protein 2) | ESR1 | estrogen receptor 1 | C17orf39 | chromosome 17 open reading frame 39 |
| OLIG3 | oligodendrocyte transcription factor 3 | THRB | thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian) | NUPL1 | nucleoporin like 1 |
| OPALIN | oligodendrocytic myelin paranodal and inner loop protein | ZBTB7A | zinc finger and BTB domain containing 7A | MAP2K4 | mitogen-activated protein kinase kinase 4 |
| OTUD7B | OTU domain containing 7B | POLDIP2 | polymerase (DNA-directed), delta interacting protein 2 | TIMM22 | translocase of inner mitochondrial membrane 22 homolog (yeast) |
| PKLR | pyruvate kinase, liver and RBC | LSM12 | LSM12 homolog (S. cerevisiae) | TOMM20 | translocase of outer mitochondrial membrane 20 homolog (yeast) |
| PLAC4 | placenta-specific 4 | DCUN1D3 | DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) | 42072 | membrane-associated ring finger (C3HC4) 9 |
| PNCK | pregnancy up-regulated non-ubiquitously expressed CaM kinase | ESRRA | estrogen-related receptor alpha | LIN7C | lin-7 homolog C (C. elegans) |
| PPP1R16B | protein phosphatase 1, regulatory (inhibitor) subunit 16B | ATG16L1 | ATG16 autophagy related 16-like 1 (S. cerevisiae) | CCDC4 | coiled-coil domain containing 4 |
| PVRL1 | poliovirus receptor-related 1 (herpesvirus entry mediator C) | DSCAML1 | Down syndrome cell adhesion molecule like 1 | HOMER2 | homer homolog 2 (Drosophila) |
| RGS6 | regulator of G-protein signaling 6 | PCTK1 | PCTAIRE protein kinase 1 | ATP2C1 | ATPase, Ca++ transporting, type 2C, member 1 |
| RHCG | Rh family, C glycoprotein | RFTN1 | raftlin, lipid raft linker 1 | RNF121 | ring finger protein 121 |
| RIMS4 | regulating synaptic membrane exocytosis 4 | ZNF618 | zinc finger protein 618 | SLC11A1 | solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 |
| RNF43 | ring finger protein 43 | SMC1A | structural maintenance of chromosomes 1A | GPR62 | G protein-coupled receptor 62 |
| SAMD12 | sterile alpha motif domain containing 12 | EXTL3 | exostoses (multiple)-like 3 | MLL2 | myeloid/lymphoid or mixed-lineage leukemia 2 |
| SH3TC2 | SH3 domain and tetratricopeptide repeats 2 | TIMM17B | translocase of inner mitochondrial membrane 17 homolog B (yeast) | LMO4 | LIM domain only 4 |
| SLC6A17 | solute carrier family 6, member 17 | RAB11FIP5 | RAB11 family interacting protein 5 (class I) | DHDDS | dehydrodolichyl diphosphate synthase |
| SPTB | spectrin, beta, erythrocytic (includes spherocytosis, clinical type I) | DYRK2 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 | C11orf9 | chromosome 11 open reading frame 9 |
| SRPX2 | sushi-repeat-containing protein, X-linked 2 | LOC387856 | similar to expressed sequence AI836003 | LIPH | lipase, member H |
| STRBP | spermatid perinuclear RNA binding protein | C7orf43 | chromosome 7 open reading frame 43 | KCNQ1 | potassium voltage-gated channel, KQT-like subfamily, member 1 |
| SYT7 | synaptotagmin VII | RNFT2 | ring finger protein, transmembrane 2 | LMX1A | LIM homeobox transcription factor 1, alpha |
| TGM2 | transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) | SMEK1 | SMEK homolog 1, suppressor of mek1 (Dictyostelium) | EDEM1 | ER degradation enhancer, mannosidase alpha-like 1 |
| TMEM115 | transmembrane protein 115 | KCNJ10 | potassium inwardly-rectifying channel, subfamily J, member 10 | FOXN3 | forkhead box N3 |
| TMPRSS6 | transmembrane protease, serine 6 | RASGEF1A | RasGEF domain family, member 1A | E2F3 | E2F transcription factor 3 |
| TNNI1 | troponin I type 1 (skeletal, slow) | FZD5 | frizzled homolog 5 (Drosophila) | PHF21A | PHD finger protein 21A |
| TRPS1 | trichorhinophalangeal syndrome I | SMG1 | PI-3-kinase-related kinase SMG-1 | SETD7 | SET domain containing (lysine methyltransferase) 7 |
| TTBK1 | tau tubulin kinase 1 | ARL4C | ADP-ribosylation factor-like 4C | CDC14B | CDC14 cell division cycle 14 homolog B (S. cerevisiae) |
| VEGFA | vascular endothelial growth factor A | BACE1 | beta-site APP-cleaving enzyme 1 | HNRNPA3 | heterogeneous nuclear ribonucleoprotein A3 |
| ZBTB4 | zinc finger and BTB domain containing 4 | FSTL4 | follistatin-like 4 | EEF2K | eukaryotic elongation factor-2 kinase |
| ZNF157 | zinc finger protein 157 | USP46 | ubiquitin specific peptidase 46 | ||
| ZNF282 | zinc finger protein 282 | TMEM55B | transmembrane protein 55B | ||
| ABCG4 | ATP-binding cassette, sub-family G (WHITE), member 4 | ZCCHC14 | zinc finger, CCHC domain containing 14 | ||
| ANKRD13B | ankyrin repeat domain 13B | AJAP1 | adherens junctions associated protein 1 | ||
| ANKRD52 | ankyrin repeat domain 52 | TET2 | tet oncogene family member 2 | ||
| AQP10 | aquaporin 10 | KCNH3 | potassium voltage-gated channel, subfamily H (eag-related), member 3 | ||
| ARIH2 | ariadne homolog 2 (Drosophila) | BMP1 | bone morphogenetic protein 1 | ||
| B4GALT2 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 | DCX | doublecortex; lissencephaly, X-linked (doublecortin) | ||
| BSDC1 | BSD domain containing 1 | BMF | Bcl2 modifying factor | ||
| BSN | bassoon (presynaptic cytomatrix protein) | HIPK2 | homeodomain interacting protein kinase 2 | ||
| BTNL3 | butyrophilin-like 3 | CPLX2 | complexin 2 | ||
| CA5B | carbonic anhydrase VB, mitochondrial | PPP1R1B | protein phosphatase 1, regulatory (inhibitor) subunit 1B (dopamine and cAMP regulated phosphoprotein, DARPP-32) | ||
| CACNA1C | calcium channel, voltage-dependent, L type, alpha 1C subunit | AQP2 | aquaporin 2 (collecting duct) | ||
| CALR | calreticulin | STOML1 | stomatin (EPB72)-like 1 | ||
| CAMKK1 | calcium/calmodulin-dependent protein kinase kinase 1, alpha | SNX27 | sorting nexin family member 27 | ||
| CD226 | CD226 molecule | SLC31A1 | solute carrier family 31 (copper transporters), member 1 | ||
| CDRT1 | CMT1A duplicated region transcript 1 | PCYT1B | phosphate cytidylyltransferase 1, choline, beta | ||
| CSNK1G1 | casein kinase 1, gamma 1 | GNG2 | guanine nucleotide binding protein (G protein), gamma 2 | ||
| DBN1 | drebrin 1 | TFAP2B | transcription factor AP-2 beta (activating enhancer binding protein 2 beta) | ||
| DDX6 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 | PSD | pleckstrin and Sec7 domain containing | ||
| ELFN2 | extracellular leucine-rich repeat and fibronectin type III domain containing 2 | ETV5 | ets variant gene 5 (ets-related molecule) | ||
| FBXO41 | F-box protein 41 | ||||
| FBXW2 | F-box and WD repeat domain containing 2 | ||||
| FGF11 | fibroblast growth factor 11 | ||||
| GDF6 | growth differentiation factor 6 | ||||
| HEMK1 | HemK methyltransferase family member 1 | ||||
| HNRNPUL1 | heterogeneous nuclear ribonucleoprotein U-like 1 | ||||
| IGF2BP2 | insulin-like growth factor 2 mRNA binding protein 2 | ||||
| IHPK1 | inositol hexaphosphate kinase 1 | ||||
| IQGAP3 | IQ motif containing GTPase activating protein 3 | ||||
| JMJD3 | jumonji domain containing 3, histone lysine demethylase | ||||
| KCNE4 | potassium voltage-gated channel, Isk-related family, member 4 | ||||
| KCNK13 | potassium channel, subfamily K, member 13 | ||||
| KIAA0100 | KIAA0100 | ||||
| KIAA1522 | KIAA1522 | ||||
| KLF13 | Kruppel-like factor 13 | ||||
| LASP1 | LIM and SH3 protein 1 | ||||
| LOC283871 | hypothetical protein LOC283871 | ||||
| LPIN2 | lipin 2 | ||||
| LPPR2 | lipid phosphate phosphatase-related protein type 2 | ||||
| MAN1C1 | mannosidase, alpha, class 1C, member 1 | ||||
| MAP3K1 | mitogen-activated protein kinase kinase kinase 1 | ||||
| MMP24 | matrix metallopeptidase 24 (membrane-inserted) | ||||
| N4BP1 | NEDD4 binding protein 1 | ||||
| NCDN | neurochondrin | ||||
| NOVA2 | neuro-oncological ventral antigen 2 | ||||
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | ||||
| PDE4D | phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) | ||||
| PDSS2 | prenyl (decaprenyl) diphosphate synthase, subunit 2 | ||||
| PGM5 | phosphoglucomutase 5 | ||||
| PLEKHO2 | pleckstrin homology domain containing, family O member 2 | ||||
| PLXNA4 | plexin A4 | ||||
| POR | P450 (cytochrome) oxidoreductase | ||||
| PSME3 | proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) | ||||
| PSRC1 | proline/serine-rich coiled-coil 1 | ||||
| RARG | retinoic acid receptor, gamma | ||||
| RBM9 | RNA binding motif protein 9 | ||||
| RC3H1 | ring finger and CCCH-type zinc finger domains 1 | ||||
| SH3PXD2A | SH3 and PX domains 2A | ||||
| SNCB | synuclein, beta | ||||
| SP1 | Sp1 transcription factor | ||||
| SP3 | Sp3 transcription factor | ||||
| SPON1 | spondin 1, extracellular matrix protein | ||||
| ST3GAL2 | ST3 beta-galactoside alpha-2,3-sialyltransferase 2 | ||||
| STXBP5L | syntaxin binding protein 5-like | ||||
| SYN2 | synapsin II | ||||
| SYT11 | synaptotagmin XI | ||||
| TBC1D5 | TBC1 domain family, member 5 | ||||
| TBKBP1 | TBK1 binding protein 1 | ||||
| TEAD3 | TEA domain family member 3 | ||||
| TMEM184A | transmembrane protein 184A | ||||
| TNK2 | tyrosine kinase, non-receptor, 2 | ||||
| TNPO2 | transportin 2 (importin 3, karyopherin beta 2b) | ||||
| TRAF4 | TNF receptor-associated factor 4 | ||||
| TYSND1 | trypsin domain containing 1 | ||||
| UPF1 | UPF1 regulator of nonsense transcripts homolog (yeast) | ||||
| UST | uronyl-2-sulfotransferase | ||||
| VPS25 | vacuolar protein sorting 25 homolog (S. cerevisiae) | ||||
| WDR22 | WD repeat domain 22 | ||||
| WDR68 | WD repeat domain 68 | ||||
| XPO6 | exportin 6 | ||||
| ZRANB2 | zinc finger, RAN-binding domain containing 2 | ||||
| B4GALT5 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 | ||||
| C19orf50 | chromosome 19 open reading frame 50 | ||||
| CALN1 | calneuron 1 | ||||
| CAMK2A | calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha | ||||
| CNTN2 | contactin 2 (axonal) | ||||
| CSMD2 | CUB and Sushi multiple domains 2 | ||||
| DEFB132 | defensin, beta 32 | ||||
| DNAJB12 | DnaJ (Hsp40) homolog, subfamily B, member 12 | ||||
| FAM129B | family with sequence similarity 129, member B | ||||
| GAB2 | GRB2-associated binding protein 2 | ||||
| GEFT | RhoA/RAC/CDC42 exchange factor | ||||
| KCNA1 | potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia) | ||||
| KCNG3 | potassium voltage-gated channel, subfamily G, member 3 | ||||
| KIAA1853 | KIAA1853 | ||||
| MRPL49 | mitochondrial ribosomal protein L49 | ||||
| NBL1 | neuroblastoma, suppression of tumorigenicity 1 | ||||
| NFATC1 | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 | ||||
| NLGN2 | neuroligin 2 | ||||
| OSBPL9 | oxysterol binding protein-like 9 | ||||
| OXR1 | oxidation resistance 1 | ||||
| REPS2 | RALBP1 associated Eps domain containing 2 | ||||
| RUNX1 | runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) | ||||
| RXRA | retinoid X receptor, alpha | ||||
| SGSM1 | small G protein signaling modulator 1 | ||||
| SSRP1 | structure specific recognition protein 1 | ||||
| TBX15 | T-box 15 | ||||
| TNFAIP1 | tumor necrosis factor, alpha-induced protein 1 (endothelial) | ||||
| TP53INP1 | tumor protein p53 inducible nuclear protein 1 | ||||
| TRAF1 | TNF receptor-associated factor 1 | ||||
| TRIB2 | tribbles homolog 2 (Drosophila) | ||||
| TRIM62 | tripartite motif-containing 62 | ||||
| UBR7 | ubiquitin protein ligase E3 component n-recognin 7 (putative) | ||||
| ZNF395 | zinc finger protein 395 | ||||
| ZNF710 | zinc finger protein 710 |