isomiR Target Prediction
| isomiR-specific | GeneTitle | Shared | GeneTitle | Canonical miRNA-specific | GeneTitle |
|---|---|---|---|---|---|
| ARC | activity-regulated cytoskeleton-associated protein | TFAM | transcription factor A, mitochondrial | PRKAA1 | protein kinase, AMP-activated, alpha 1 catalytic subunit |
| C9orf58 | chromosome 9 open reading frame 58 | RGS7BP | regulator of G-protein signaling 7 binding protein | TMPRSS4 | transmembrane protease, serine 4 |
| CDCP1 | CUB domain containing protein 1 | POU4F1 | POU class 4 homeobox 1 | SPTLC2 | serine palmitoyltransferase, long chain base subunit 2 |
| CYP26B1 | cytochrome P450, family 26, subfamily B, polypeptide 1 | SMAD2 | SMAD family member 2 | EPM2AIP1 | EPM2A (laforin) interacting protein 1 |
| GAB3 | GRB2-associated binding protein 3 | MFAP4 | microfibrillar-associated protein 4 | MMACHC | methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria |
| GJA5 | gap junction protein, alpha 5, 40kDa | DKFZP564O0823 | DKFZP564O0823 protein | AKT3 | v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) |
| KIAA1324L | KIAA1324-like | GJB7 | gap junction protein, beta 7, 25kDa | TBC1D20 | TBC1 domain family, member 20 |
| KLHL12 | kelch-like 12 (Drosophila) | WDR37 | WD repeat domain 37 | PSD2 | pleckstrin and Sec7 domain containing 2 |
| KPNA6 | karyopherin alpha 6 (importin alpha 7) | CEP164 | centrosomal protein 164kDa | CEP57 | centrosomal protein 57kDa |
| LPHN3 | latrophilin 3 | TPD52 | tumor protein D52 | IMPDH1 | IMP (inosine monophosphate) dehydrogenase 1 |
| SNX18 | sorting nexin 18 | UBE2G1 | ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) | NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 |
| SPIRE1 | spire homolog 1 (Drosophila) | MAP3K7IP3 | mitogen-activated protein kinase kinase kinase 7 interacting protein 3 | LOC348174 | secretory protein LOC348174 |
| SS18 | synovial sarcoma translocation, chromosome 18 | CREB5 | cAMP responsive element binding protein 5 | LOC497190 | secretory protein LOC497190 |
| SUDS3 | suppressor of defective silencing 3 homolog (S. cerevisiae) | BMPR2 | bone morphogenetic protein receptor, type II (serine/threonine kinase) | MGC34761 | hypothetical protein MGC34761 |
| TBL1X | transducin (beta)-like 1X-linked | NUMBL | numb homolog (Drosophila)-like | FBXO21 | F-box protein 21 |
| TXLNB | taxilin beta | EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | ZBTB44 | zinc finger and BTB domain containing 44 |
| UBE2D3 | ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) | PSD3 | pleckstrin and Sec7 domain containing 3 | TNNI3K | TNNI3 interacting kinase |
| C10orf49 | chromosome 10 open reading frame 49 | CBX7 | chromobox homolog 7 | DIO2 | deiodinase, iodothyronine, type II |
| FAM119A | family with sequence similarity 119, member A | SSH2 | slingshot homolog 2 (Drosophila) | CPEB1 | cytoplasmic polyadenylation element binding protein 1 |
| FAM54B | family with sequence similarity 54, member B | PTCH1 | patched homolog 1 (Drosophila) | GREM2 | gremlin 2, cysteine knot superfamily, homolog (Xenopus laevis) |
| GCNT2 | glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) | FOXJ2 | forkhead box J2 | VPS37C | vacuolar protein sorting 37 homolog C (S. cerevisiae) |
| GGT7 | gamma-glutamyltransferase 7 | SMCHD1 | structural maintenance of chromosomes flexible hinge domain containing 1 | SUFU | suppressor of fused homolog (Drosophila) |
| KCNH4 | potassium voltage-gated channel, subfamily H (eag-related), member 4 | ZNF629 | zinc finger protein 629 | HIF1AN | hypoxia-inducible factor 1, alpha subunit inhibitor |
| KCNJ10 | potassium inwardly-rectifying channel, subfamily J, member 10 | TET3 | tet oncogene family member 3 | AGPAT1 | 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) |
| KCNK9 | potassium channel, subfamily K, member 9 | GRID1 | glutamate receptor, ionotropic, delta 1 | MKRN1 | makorin, ring finger protein, 1 |
| KIAA1199 | KIAA1199 | PACSIN1 | protein kinase C and casein kinase substrate in neurons 1 | PDCL | phosducin-like |
| LOC348262 | hypothetical protein LOC348262 | NXF5 | nuclear RNA export factor 5 | CLASP1 | cytoplasmic linker associated protein 1 |
| NDN | necdin homolog (mouse) | ETS1 | v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) | UBE2R2 | ubiquitin-conjugating enzyme E2R 2 |
| NNAT | neuronatin | CAMLG | calcium modulating ligand | MYOG | myogenin (myogenic factor 4) |
| OLFML2B | olfactomedin-like 2B | WIPF2 | WAS/WASL interacting protein family, member 2 | ARID1A | AT rich interactive domain 1A (SWI-like) |
| RCAN2 | regulator of calcineurin 2 | ZXDC | ZXD family zinc finger C | DIP2B | DIP2 disco-interacting protein 2 homolog B (Drosophila) |
| RYBP | RING1 and YY1 binding protein | LPHN1 | latrophilin 1 | SYP | synaptophysin |
| SMARCD1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 | LIF | leukemia inhibitory factor (cholinergic differentiation factor) | NAV1 | neuron navigator 1 |
| SUV420H2 | suppressor of variegation 4-20 homolog 2 (Drosophila) | C20orf74 | chromosome 20 open reading frame 74 | TGFBR1 | transforming growth factor, beta receptor I (activin A receptor type II-like kinase, 53kDa) |
| YWHAE | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide | LSM12 | LSM12 homolog (S. cerevisiae) | ||
| AK3L1 | adenylate kinase 3-like 1 | C14orf101 | chromosome 14 open reading frame 101 | ||
| AOC3 | amine oxidase, copper containing 3 (vascular adhesion protein 1) | ABHD2 | abhydrolase domain containing 2 | ||
| APC | adenomatous polyposis coli | TNS1 | tensin 1 | ||
| C10orf26 | chromosome 10 open reading frame 26 | TBR1 | T-box, brain, 1 | ||
| C14orf124 | chromosome 14 open reading frame 124 | TNPO2 | transportin 2 (importin 3, karyopherin beta 2b) | ||
| CHL1 | cell adhesion molecule with homology to L1CAM (close homolog of L1) | KCNK3 | potassium channel, subfamily K, member 3 | ||
| EIF4A2 | eukaryotic translation initiation factor 4A, isoform 2 | SCAMP5 | secretory carrier membrane protein 5 | ||
| FAM101B | family with sequence similarity 101, member B | SLC16A12 | solute carrier family 16, member 12 (monocarboxylic acid transporter 12) | ||
| GRLF1 | glucocorticoid receptor DNA binding factor 1 | FOXJ1 | forkhead box J1 | ||
| GRSF1 | G-rich RNA sequence binding factor 1 | ST7L | suppression of tumorigenicity 7 like | ||
| KLF14 | Kruppel-like factor 14 | TSC22D3 | TSC22 domain family, member 3 | ||
| LITAF | lipopolysaccharide-induced TNF factor | C14orf43 | chromosome 14 open reading frame 43 | ||
| MKL2 | MKL/myocardin-like 2 | PKNOX2 | PBX/knotted 1 homeobox 2 | ||
| MTCH2 | mitochondrial carrier homolog 2 (C. elegans) | KIRREL | kin of IRRE like (Drosophila) | ||
| NOTCH2 | Notch homolog 2 (Drosophila) | WNT4 | wingless-type MMTV integration site family, member 4 | ||
| OLA1 | Obg-like ATPase 1 | CAMK1G | calcium/calmodulin-dependent protein kinase IG | ||
| SEL1L | sel-1 suppressor of lin-12-like (C. elegans) | AGPAT4 | 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) | ||
| SPOCK1 | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 | FAM53B | family with sequence similarity 53, member B | ||
| SRL | sarcalumenin | ELK1 | ELK1, member of ETS oncogene family | ||
| TOB2 | transducer of ERBB2, 2 | APLN | apelin | ||
| WIT1 | Wilms tumor upstream neighbor 1 | SOX12 | SRY (sex determining region Y)-box 12 | ||
| ZFHX4 | zinc finger homeobox 4 |