isomiR Target Prediction
| isomiR-specific | GeneTitle | Shared | GeneTitle | Canonical miRNA-specific | GeneTitle |
|---|---|---|---|---|---|
| C8orf79 | chromosome 8 open reading frame 79 | RYBP | RING1 and YY1 binding protein | SPRY4 | sprouty homolog 4 (Drosophila) |
| CCNJ | cyclin J | C21orf91 | chromosome 21 open reading frame 91 | ||
| CDH12 | cadherin 12, type 2 (N-cadherin 2) | UBE2R2 | ubiquitin-conjugating enzyme E2R 2 | ||
| CHL1 | cell adhesion molecule with homology to L1CAM (close homolog of L1) | MAP3K1 | mitogen-activated protein kinase kinase kinase 1 | ||
| COL11A1 | collagen, type XI, alpha 1 | SP2 | Sp2 transcription factor | ||
| EFEMP1 | EGF-containing fibulin-like extracellular matrix protein 1 | AKAP5 | A kinase (PRKA) anchor protein 5 | ||
| FRAP1 | FK506 binding protein 12-rapamycin associated protein 1 | CALML4 | calmodulin-like 4 | ||
| FZD3 | frizzled homolog 3 (Drosophila) | FLJ46481 | FLJ46481 protein | ||
| HEG1 | HEG homolog 1 (zebrafish) | CDH2 | cadherin 2, type 1, N-cadherin (neuronal) | ||
| HP1BP3 | heterochromatin protein 1, binding protein 3 | C6orf145 | chromosome 6 open reading frame 145 | ||
| KATNAL1 | katanin p60 subunit A-like 1 | TNRC6B | trinucleotide repeat containing 6B | ||
| KCNC1 | potassium voltage-gated channel, Shaw-related subfamily, member 1 | HNRNPH3 | heterogeneous nuclear ribonucleoprotein H3 (2H9) | ||
| KCNMA1 | potassium large conductance calcium-activated channel, subfamily M, alpha member 1 | SCD5 | stearoyl-CoA desaturase 5 | ||
| LAMA3 | laminin, alpha 3 | SFRS2IP | splicing factor, arginine/serine-rich 2, interacting protein | ||
| LENG8 | leukocyte receptor cluster (LRC) member 8 | EIF4G2 | eukaryotic translation initiation factor 4 gamma, 2 | ||
| MLLT10 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 | PPFIA1 | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 | ||
| NKD1 | naked cuticle homolog 1 (Drosophila) | GTF2I | general transcription factor II, i | ||
| NOL4 | nucleolar protein 4 | CPEB4 | cytoplasmic polyadenylation element binding protein 4 | ||
| PDE11A | phosphodiesterase 11A | PUM1 | pumilio homolog 1 (Drosophila) | ||
| PGR | progesterone receptor | CREBZF | CREB/ATF bZIP transcription factor | ||
| PLEC1 | plectin 1, intermediate filament binding protein 500kDa | MAML3 | mastermind-like 3 (Drosophila) | ||
| PTGES3 | prostaglandin E synthase 3 (cytosolic) | SET | SET nuclear oncogene | ||
| SCOC | short coiled-coil protein | SMAD4 | SMAD family member 4 | ||
| SELM | selenoprotein M | FOXO1 | forkhead box O1 | ||
| SFXN2 | sideroflexin 2 | NAB1 | NGFI-A binding protein 1 (EGR1 binding protein 1) | ||
| ST8SIA4 | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 | FBXL5 | F-box and leucine-rich repeat protein 5 | ||
| STK38L | serine/threonine kinase 38 like | RAPGEF2 | Rap guanine nucleotide exchange factor (GEF) 2 | ||
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | MIB1 | mindbomb homolog 1 (Drosophila) | ||
| TMPRSS5 | transmembrane protease, serine 5 (spinesin) | SF3B3 | splicing factor 3b, subunit 3, 130kDa | ||
| VEGFC | vascular endothelial growth factor C | CACHD1 | cache domain containing 1 | ||
| ZBTB26 | zinc finger and BTB domain containing 26 | UTX | ubiquitously transcribed tetratricopeptide repeat, X chromosome | ||
| C1QL3 | complement component 1, q subcomponent-like 3 | NUDT4 | nudix (nucleoside diphosphate linked moiety X)-type motif 4 | ||
| COX4NB | COX4 neighbor | TMEM189 | transmembrane protein 189 | ||
| CSMD3 | CUB and Sushi multiple domains 3 | ZNRF3 | zinc and ring finger 3 | ||
| EPN2 | epsin 2 | KLC1 | kinesin light chain 1 | ||
| ESRRG | estrogen-related receptor gamma | ZNF518A | zinc finger protein 518A | ||
| ITCH | itchy E3 ubiquitin protein ligase homolog (mouse) | YAF2 | YY1 associated factor 2 | ||
| KDELR2 | KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 | ERBB4 | v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) | ||
| MALT1 | mucosa associated lymphoid tissue lymphoma translocation gene 1 | BTRC | beta-transducin repeat containing | ||
| MIER1 | mesoderm induction early response 1 homolog (Xenopus laevis) | ZFAND5 | zinc finger, AN1-type domain 5 | ||
| MXD1 | MAX dimerization protein 1 | USP32 | ubiquitin specific peptidase 32 | ||
| NAMPT | nicotinamide phosphoribosyltransferase | SP1 | Sp1 transcription factor | ||
| PPAP2B | phosphatidic acid phosphatase type 2B | APOLD1 | apolipoprotein L domain containing 1 | ||
| PPP3R1 | protein phosphatase 3 (formerly 2B), regulatory subunit B, alpha isoform | USP6 | ubiquitin specific peptidase 6 (Tre-2 oncogene) | ||
| PYGO2 | pygopus homolog 2 (Drosophila) | CD200 | CD200 molecule | ||
| SLC39A10 | solute carrier family 39 (zinc transporter), member 10 | KLHL3 | kelch-like 3 (Drosophila) | ||
| SLC8A2 | solute carrier family 8 (sodium-calcium exchanger), member 2 | MAP2K1 | mitogen-activated protein kinase kinase 1 | ||
| SPCS2 | signal peptidase complex subunit 2 homolog (S. cerevisiae) | LRRC59 | leucine rich repeat containing 59 | ||
| TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 | POU4F1 | POU class 4 homeobox 1 | ||
| ZFYVE20 | zinc finger, FYVE domain containing 20 | C11orf41 | chromosome 11 open reading frame 41 | ||
| ZNF148 | zinc finger protein 148 | EIF2C1 | eukaryotic translation initiation factor 2C, 1 | ||
| ABCC4 | ATP-binding cassette, sub-family C (CFTR/MRP), member 4 | FAM175B | family with sequence similarity 175, member B | ||
| ACTR1A | ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) | SMCR8 | Smith-Magenis syndrome chromosome region, candidate 8 | ||
| ALDH1A2 | aldehyde dehydrogenase 1 family, member A2 | CLCN5 | chloride channel 5 (nephrolithiasis 2, X-linked, Dent disease) | ||
| C14orf101 | chromosome 14 open reading frame 101 | CAMKK2 | calcium/calmodulin-dependent protein kinase kinase 2, beta | ||
| C15orf29 | chromosome 15 open reading frame 29 | NAV3 | neuron navigator 3 | ||
| C5orf23 | chromosome 5 open reading frame 23 | PREX1 | phosphatidylinositol 3,4,5-trisphosphate-dependent RAC exchanger 1 | ||
| CD9 | CD9 molecule | KIAA0644 | KIAA0644 gene product | ||
| CRISPLD1 | cysteine-rich secretory protein LCCL domain containing 1 | SEMA3A | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A | ||
| CUL3 | cullin 3 | FNIP1 | folliculin interacting protein 1 | ||
| CUX1 | cut-like homeobox 1 | RANBP2 | RAN binding protein 2 | ||
| DDIT4L | DNA-damage-inducible transcript 4-like | SHANK2 | SH3 and multiple ankyrin repeat domains 2 | ||
| EGR2 | early growth response 2 (Krox-20 homolog, Drosophila) | ||||
| HMGB1 | high-mobility group box 1 | ||||
| IGFBP5 | insulin-like growth factor binding protein 5 | ||||
| KCTD21 | potassium channel tetramerisation domain containing 21 | ||||
| KIAA0152 | KIAA0152 | ||||
| KIF13B | kinesin family member 13B | ||||
| MMD | monocyte to macrophage differentiation-associated | ||||
| MSN | moesin | ||||
| NUFIP2 | nuclear fragile X mental retardation protein interacting protein 2 | ||||
| PALM2 | paralemmin 2 | ||||
| PELI2 | pellino homolog 2 (Drosophila) | ||||
| PJA2 | praja 2, RING-H2 motif containing | ||||
| PLEK | pleckstrin | ||||
| PURB | purine-rich element binding protein B | ||||
| RALA | v-ral simian leukemia viral oncogene homolog A (ras related) | ||||
| RNF144A | ring finger protein 144A | ||||
| SMARCAD1 | SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 | ||||
| SMOC2 | SPARC related modular calcium binding 2 | ||||
| TMEM19 | transmembrane protein 19 | ||||
| TTYH3 | tweety homolog 3 (Drosophila) | ||||
| WASF1 | WAS protein family, member 1 | ||||
| WNK4 | WNK lysine deficient protein kinase 4 | ||||
| ZMYM4 | zinc finger, MYM-type 4 | ||||
| ZNF214 | zinc finger protein 214 | ||||
| ZNF276 | zinc finger protein 276 |