isomiR Target Prediction
| isomiR-specific | GeneTitle | Shared | GeneTitle | Canonical miRNA-specific | GeneTitle |
|---|---|---|---|---|---|
| GEMIN8 | gem (nuclear organelle) associated protein 8 | SPRY4 | sprouty homolog 4 (Drosophila) | C21orf91 | chromosome 21 open reading frame 91 |
| ABLIM1 | actin binding LIM protein 1 | UBE2R2 | ubiquitin-conjugating enzyme E2R 2 | AKAP5 | A kinase (PRKA) anchor protein 5 |
| C18orf1 | chromosome 18 open reading frame 1 | MAP3K1 | mitogen-activated protein kinase kinase kinase 1 | FLJ46481 | FLJ46481 protein |
| C3orf15 | chromosome 3 open reading frame 15 | SP2 | Sp2 transcription factor | SFRS2IP | splicing factor, arginine/serine-rich 2, interacting protein |
| CLIP2 | CAP-GLY domain containing linker protein 2 | CALML4 | calmodulin-like 4 | EIF4G2 | eukaryotic translation initiation factor 4 gamma, 2 |
| CPD | carboxypeptidase D | CDH2 | cadherin 2, type 1, N-cadherin (neuronal) | PPFIA1 | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 |
| CTSS | cathepsin S | C6orf145 | chromosome 6 open reading frame 145 | GTF2I | general transcription factor II, i |
| DAAM2 | dishevelled associated activator of morphogenesis 2 | TNRC6B | trinucleotide repeat containing 6B | CPEB4 | cytoplasmic polyadenylation element binding protein 4 |
| FAM120C | family with sequence similarity 120C | HNRNPH3 | heterogeneous nuclear ribonucleoprotein H3 (2H9) | PUM1 | pumilio homolog 1 (Drosophila) |
| FAM129B | family with sequence similarity 129, member B | SCD5 | stearoyl-CoA desaturase 5 | CREBZF | CREB/ATF bZIP transcription factor |
| FBXL3 | F-box and leucine-rich repeat protein 3 | MAML3 | mastermind-like 3 (Drosophila) | SET | SET nuclear oncogene |
| FZD4 | frizzled homolog 4 (Drosophila) | SMAD4 | SMAD family member 4 | FOXO1 | forkhead box O1 |
| HLF | hepatic leukemia factor | CACHD1 | cache domain containing 1 | NAB1 | NGFI-A binding protein 1 (EGR1 binding protein 1) |
| HSD17B4 | hydroxysteroid (17-beta) dehydrogenase 4 | KLC1 | kinesin light chain 1 | FBXL5 | F-box and leucine-rich repeat protein 5 |
| KIAA0329 | KIAA0329 | YAF2 | YY1 associated factor 2 | RAPGEF2 | Rap guanine nucleotide exchange factor (GEF) 2 |
| KIF21A | kinesin family member 21A | USP32 | ubiquitin specific peptidase 32 | MIB1 | mindbomb homolog 1 (Drosophila) |
| LIMD1 | LIM domains containing 1 | SP1 | Sp1 transcription factor | SF3B3 | splicing factor 3b, subunit 3, 130kDa |
| LPGAT1 | lysophosphatidylglycerol acyltransferase 1 | USP6 | ubiquitin specific peptidase 6 (Tre-2 oncogene) | UTX | ubiquitously transcribed tetratricopeptide repeat, X chromosome |
| LRRC19 | leucine rich repeat containing 19 | LRRC59 | leucine rich repeat containing 59 | NUDT4 | nudix (nucleoside diphosphate linked moiety X)-type motif 4 |
| LRRC57 | leucine rich repeat containing 57 | FAM175B | family with sequence similarity 175, member B | RYBP | RING1 and YY1 binding protein |
| MBNL2 | muscleblind-like 2 (Drosophila) | CLCN5 | chloride channel 5 (nephrolithiasis 2, X-linked, Dent disease) | TMEM189 | transmembrane protein 189 |
| MEX3C | mex-3 homolog C (C. elegans) | CAMKK2 | calcium/calmodulin-dependent protein kinase kinase 2, beta | ZNRF3 | zinc and ring finger 3 |
| MRPL11 | mitochondrial ribosomal protein L11 | PREX1 | phosphatidylinositol 3,4,5-trisphosphate-dependent RAC exchanger 1 | ZNF518A | zinc finger protein 518A |
| PFN1 | profilin 1 | KIAA0644 | KIAA0644 gene product | ERBB4 | v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) |
| PPP1R9A | protein phosphatase 1, regulatory (inhibitor) subunit 9A | SEMA3A | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A | BTRC | beta-transducin repeat containing |
| RHOB | ras homolog gene family, member B | FNIP1 | folliculin interacting protein 1 | ZFAND5 | zinc finger, AN1-type domain 5 |
| RNF149 | ring finger protein 149 | RANBP2 | RAN binding protein 2 | APOLD1 | apolipoprotein L domain containing 1 |
| RP2 | retinitis pigmentosa 2 (X-linked recessive) | SHANK2 | SH3 and multiple ankyrin repeat domains 2 | CD200 | CD200 molecule |
| SEC22C | SEC22 vesicle trafficking protein homolog C (S. cerevisiae) | KLHL3 | kelch-like 3 (Drosophila) | ||
| SHROOM4 | shroom family member 4 | MAP2K1 | mitogen-activated protein kinase kinase 1 | ||
| SRGAP3 | SLIT-ROBO Rho GTPase activating protein 3 | POU4F1 | POU class 4 homeobox 1 | ||
| ST7 | suppression of tumorigenicity 7 | C11orf41 | chromosome 11 open reading frame 41 | ||
| STAM2 | signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 | EIF2C1 | eukaryotic translation initiation factor 2C, 1 | ||
| TFPI | tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) | SMCR8 | Smith-Magenis syndrome chromosome region, candidate 8 | ||
| TGFBR2 | transforming growth factor, beta receptor II (70/80kDa) | NAV3 | neuron navigator 3 | ||
| TPPP | tubulin polymerization promoting protein | ||||
| TROVE2 | TROVE domain family, member 2 | ||||
| USP25 | ubiquitin specific peptidase 25 | ||||
| ZDHHC3 | zinc finger, DHHC-type containing 3 | ||||
| ZNF554 | zinc finger protein 554 | ||||
| ZNF626 | zinc finger protein 626 | ||||
| RC3H1 | ring finger and CCCH-type zinc finger domains 1 | ||||
| ARHGAP5 | Rho GTPase activating protein 5 | ||||
| COG2 | component of oligomeric golgi complex 2 | ||||
| MPHOSPH8 | M-phase phosphoprotein 8 | ||||
| PA2G4 | proliferation-associated 2G4, 38kDa | ||||
| UBE2D1 | ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) | ||||
| UBE2W | ubiquitin-conjugating enzyme E2W (putative) | ||||
| ZNF516 | zinc finger protein 516 | ||||
| APLN | apelin | ||||
| C11orf59 | chromosome 11 open reading frame 59 | ||||
| C1orf130 | chromosome 1 open reading frame 130 | ||||
| COL12A1 | collagen, type XII, alpha 1 | ||||
| COL4A5 | collagen, type IV, alpha 5 (Alport syndrome) | ||||
| DDAH1 | dimethylarginine dimethylaminohydrolase 1 | ||||
| EML4 | echinoderm microtubule associated protein like 4 | ||||
| FAM19A5 | family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 | ||||
| FAM53C | family with sequence similarity 53, member C | ||||
| FNTB | farnesyltransferase, CAAX box, beta | ||||
| GALNT13 | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13) | ||||
| GATAD2B | GATA zinc finger domain containing 2B | ||||
| HERPUD2 | HERPUD family member 2 | ||||
| HIPK2 | homeodomain interacting protein kinase 2 | ||||
| HMGA2 | high mobility group AT-hook 2 | ||||
| IDH2 | isocitrate dehydrogenase 2 (NADP+), mitochondrial | ||||
| IL33 | interleukin 33 | ||||
| IQGAP2 | IQ motif containing GTPase activating protein 2 | ||||
| ITGB8 | integrin, beta 8 | ||||
| ITPK1 | inositol 1,3,4-triphosphate 5/6 kinase | ||||
| LIFR | leukemia inhibitory factor receptor alpha | ||||
| PRICKLE2 | prickle homolog 2 (Drosophila) | ||||
| PRPF40A | PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) | ||||
| PTER | phosphotriesterase related | ||||
| STAU1 | staufen, RNA binding protein, homolog 1 (Drosophila) | ||||
| TLR4 | toll-like receptor 4 | ||||
| TRIOBP | TRIO and F-actin binding protein | ||||
| UBAP1 | ubiquitin associated protein 1 | ||||
| UHRF2 | ubiquitin-like, containing PHD and RING finger domains, 2 | ||||
| UQCRB | ubiquinol-cytochrome c reductase binding protein | ||||
| ZDHHC14 | zinc finger, DHHC-type containing 14 | ||||
| ZNF664 | zinc finger protein 664 |