isomiR Target Prediction
| isomiR-specific | GeneTitle | Shared | GeneTitle | Canonical miRNA-specific | GeneTitle |
|---|---|---|---|---|---|
| ACVR1B | activin A receptor, type IB | RRP1B | ribosomal RNA processing 1 homolog B (S. cerevisiae) | KIAA1522 | KIAA1522 |
| AKAP7 | A kinase (PRKA) anchor protein 7 | CBL | Cas-Br-M (murine) ecotropic retroviral transforming sequence | SDAD1 | SDA1 domain containing 1 |
| ANTXR1 | anthrax toxin receptor 1 | PLAGL2 | pleiomorphic adenoma gene-like 2 | METTL4 | methyltransferase like 4 |
| ASXL1 | additional sex combs like 1 (Drosophila) | IGF1R | insulin-like growth factor 1 receptor | CDC40 | cell division cycle 40 homolog (S. cerevisiae) |
| BHLHB3 | basic helix-loop-helix domain containing, class B, 3 | FOXG1 | forkhead box G1 | PHC3 | polyhomeotic homolog 3 (Drosophila) |
| C1orf56 | chromosome 1 open reading frame 56 | KIAA1219 | KIAA1219 | SULF1 | sulfatase 1 |
| CUX2 | cut-like homeobox 2 | PAX8 | paired box 8 | RBMS3 | RNA binding motif, single stranded interacting protein |
| CYP51A1 | cytochrome P450, family 51, subfamily A, polypeptide 1 | PAPOLA | poly(A) polymerase alpha | BMP2 | bone morphogenetic protein 2 |
| DPP10 | dipeptidyl-peptidase 10 | MKL2 | MKL/myocardin-like 2 | NEUROD1 | neurogenic differentiation 1 |
| EN2 | engrailed homeobox 2 | C1orf21 | chromosome 1 open reading frame 21 | VANGL1 | vang-like 1 (van gogh, Drosophila) |
| ENPEP | glutamyl aminopeptidase (aminopeptidase A) | CALN1 | calneuron 1 | AAK1 | AP2 associated kinase 1 |
| EVI1 | ecotropic viral integration site 1 | ANKRD52 | ankyrin repeat domain 52 | KPNA6 | karyopherin alpha 6 (importin alpha 7) |
| FAM129A | family with sequence similarity 129, member A | CSNK1G2 | casein kinase 1, gamma 2 | PAPD5 | PAP associated domain containing 5 |
| GNAI2 | guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 | FZD5 | frizzled homolog 5 (Drosophila) | MED12L | mediator complex subunit 12-like |
| GNAT1 | guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 | SARM1 | sterile alpha and TIR motif containing 1 | MAPK1 | mitogen-activated protein kinase 1 |
| GPR55 | G protein-coupled receptor 55 | DBT | dihydrolipoamide branched chain transacylase E2 | PLEKHG2 | pleckstrin homology domain containing, family G (with RhoGef domain) member 2 |
| HDAC9 | histone deacetylase 9 | GRSF1 | G-rich RNA sequence binding factor 1 | ||
| HLF | hepatic leukemia factor | PURB | purine-rich element binding protein B | ||
| KITLG | KIT ligand | SLC38A1 | solute carrier family 38, member 1 | ||
| PCNA | proliferating cell nuclear antigen | RIMS4 | regulating synaptic membrane exocytosis 4 | ||
| PHC1 | polyhomeotic homolog 1 (Drosophila) | GOLT1A | golgi transport 1 homolog A (S. cerevisiae) | ||
| PHF21A | PHD finger protein 21A | SOX7 | SRY (sex determining region Y)-box 7 | ||
| PIK3CA | phosphoinositide-3-kinase, catalytic, alpha polypeptide | DCX | doublecortex; lissencephaly, X-linked (doublecortin) | ||
| PKHD1L1 | polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 | DACT1 | dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis) | ||
| PRKAA1 | protein kinase, AMP-activated, alpha 1 catalytic subunit | SLC39A9 | solute carrier family 39 (zinc transporter), member 9 | ||
| PRKAR2A | protein kinase, cAMP-dependent, regulatory, type II, alpha | MAPK1IP1L | mitogen-activated protein kinase 1 interacting protein 1-like | ||
| RALGPS1 | Ral GEF with PH domain and SH3 binding motif 1 | MED19 | mediator complex subunit 19 | ||
| RAP1B | RAP1B, member of RAS oncogene family | IQSEC2 | IQ motif and Sec7 domain 2 | ||
| RBBP5 | retinoblastoma binding protein 5 | TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 | ||
| RPS6KA3 | ribosomal protein S6 kinase, 90kDa, polypeptide 3 | SPOPL | speckle-type POZ protein-like | ||
| SLC31A1 | solute carrier family 31 (copper transporters), member 1 | DYRK1A | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A | ||
| SNAI2 | snail homolog 2 (Drosophila) | KCND1 | potassium voltage-gated channel, Shal-related subfamily, member 1 | ||
| SOCS5 | suppressor of cytokine signaling 5 | CACNA2D4 | calcium channel, voltage-dependent, alpha 2/delta subunit 4 | ||
| STIM1 | stromal interaction molecule 1 | IPO9 | importin 9 | ||
| TANC1 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 | KIAA1576 | KIAA1576 protein | ||
| TBKBP1 | TBK1 binding protein 1 | FUSIP1 | FUS interacting protein (serine/arginine-rich) 1 | ||
| TNFSF15 | tumor necrosis factor (ligand) superfamily, member 15 | QSER1 | glutamine and serine rich 1 | ||
| VAPA | VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa | NEK4 | NIMA (never in mitosis gene a)-related kinase 4 | ||
| YWHAQ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide | TLK2 | tousled-like kinase 2 | ||
| hCG_1757335 | hCG1757335 | MLZE | melanoma-derived leucine zipper, extra-nuclear factor | ||
| ALPK3 | alpha-kinase 3 | ARRDC2 | arrestin domain containing 2 | ||
| ARHGAP20 | Rho GTPase activating protein 20 | PDIK1L | PDLIM1 interacting kinase 1 like | ||
| BRD4 | bromodomain containing 4 | LBX2 | ladybird homeobox 2 | ||
| BZW1 | basic leucine zipper and W2 domains 1 | MAFG | v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian) | ||
| CALCR | calcitonin receptor | DLAT | dihydrolipoamide S-acetyltransferase | ||
| CCNJ | cyclin J | FRMPD4 | FERM and PDZ domain containing 4 | ||
| CLIC5 | chloride intracellular channel 5 | PSD3 | pleckstrin and Sec7 domain containing 3 | ||
| CROP | cisplatin resistance-associated overexpressed protein | LENG9 | leukocyte receptor cluster (LRC) member 9 | ||
| GAB2 | GRB2-associated binding protein 2 | SFRS3 | splicing factor, arginine/serine-rich 3 | ||
| GABRG2 | gamma-aminobutyric acid (GABA) A receptor, gamma 2 | HDAC4 | histone deacetylase 4 | ||
| HMGCS1 | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) | FKBP5 | FK506 binding protein 5 | ||
| IGF2BP1 | insulin-like growth factor 2 mRNA binding protein 1 | SAR1A | SAR1 gene homolog A (S. cerevisiae) | ||
| LDLRAD3 | low density lipoprotein receptor class A domain containing 3 | CBX1 | chromobox homolog 1 (HP1 beta homolog Drosophila ) | ||
| MGAT4B | mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B | H3F3B | H3 histone, family 3B (H3.3B) | ||
| NCAM1 | neural cell adhesion molecule 1 | RIT1 | Ras-like without CAAX 1 | ||
| NDRG3 | NDRG family member 3 | ZDHHC9 | zinc finger, DHHC-type containing 9 | ||
| PAPOLB | poly(A) polymerase beta (testis specific) | XPO5 | exportin 5 | ||
| PEF1 | penta-EF-hand domain containing 1 | ENAH | enabled homolog (Drosophila) | ||
| POLI | polymerase (DNA directed) iota | GRB2 | growth factor receptor-bound protein 2 | ||
| POLS | polymerase (DNA directed) sigma | GLS | glutaminase | ||
| PTPRT | protein tyrosine phosphatase, receptor type, T | CLOCK | clock homolog (mouse) | ||
| RIPK5 | receptor interacting protein kinase 5 | WDR37 | WD repeat domain 37 | ||
| RPS6KA2 | ribosomal protein S6 kinase, 90kDa, polypeptide 2 | WDR40A | WD repeat domain 40A | ||
| SLC6A17 | solute carrier family 6, member 17 | DDX3X | DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked | ||
| SLC6A9 | solute carrier family 6 (neurotransmitter transporter, glycine), member 9 | KIAA0644 | KIAA0644 gene product | ||
| SOCS6 | suppressor of cytokine signaling 6 | UBE2W | ubiquitin-conjugating enzyme E2W (putative) | ||
| SSH2 | slingshot homolog 2 (Drosophila) | TMEM129 | transmembrane protein 129 | ||
| UVRAG | UV radiation resistance associated gene | COQ10B | coenzyme Q10 homolog B (S. cerevisiae) | ||
| WSCD1 | WSC domain containing 1 | MNT | MAX binding protein | ||
| ZIC4 | Zic family member 4 | SLC30A8 | solute carrier family 30 (zinc transporter), member 8 | ||
| ZNF664 | zinc finger protein 664 | KSR1 | kinase suppressor of ras 1 | ||
| BHLHB5 | basic helix-loop-helix domain containing, class B, 5 | BCL2L2 | BCL2-like 2 | ||
| C11orf41 | chromosome 11 open reading frame 41 | NSFL1C | NSFL1 (p97) cofactor (p47) | ||
| CCDC4 | coiled-coil domain containing 4 | SPIN3 | spindlin family, member 3 | ||
| CCND2 | cyclin D2 | NFX1 | nuclear transcription factor, X-box binding 1 | ||
| CENTG2 | centaurin, gamma 2 | C17orf74 | chromosome 17 open reading frame 74 | ||
| CREBZF | CREB/ATF bZIP transcription factor | BMP8B | bone morphogenetic protein 8b | ||
| EIF2C3 | eukaryotic translation initiation factor 2C, 3 | RCC2 | regulator of chromosome condensation 2 | ||
| EIF2S1 | eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa | NUFIP2 | nuclear fragile X mental retardation protein interacting protein 2 | ||
| FOXO1 | forkhead box O1 | C6orf89 | chromosome 6 open reading frame 89 | ||
| FZD3 | frizzled homolog 3 (Drosophila) | MEF2D | myocyte enhancer factor 2D | ||
| KLF3 | Kruppel-like factor 3 (basic) | RBM14 | RNA binding motif protein 14 | ||
| ONECUT1 | one cut homeobox 1 | RNF144B | ring finger 144B | ||
| PIK3R1 | phosphoinositide-3-kinase, regulatory subunit 1 (alpha) | MPHOSPH8 | M-phase phosphoprotein 8 | ||
| PTPLA | protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A | WNT10A | wingless-type MMTV integration site family, member 10A | ||
| RANBP10 | RAN binding protein 10 | MTF1 | metal-regulatory transcription factor 1 | ||
| RBM35B | RNA binding motif protein 35B | TSPAN17 | tetraspanin 17 | ||
| RC3H1 | ring finger and CCCH-type zinc finger domains 1 | ELFN2 | extracellular leucine-rich repeat and fibronectin type III domain containing 2 | ||
| SCN5A | sodium channel, voltage-gated, type V, alpha subunit | RPL23A | ribosomal protein L23a | ||
| SPSB4 | splA/ryanodine receptor domain and SOCS box containing 4 | ||||
| STC2 | stanniocalcin 2 | ||||
| TXNDC10 | thioredoxin domain containing 10 | ||||
| USP9X | ubiquitin specific peptidase 9, X-linked | ||||
| USP9Y | ubiquitin specific peptidase 9, Y-linked (fat facets-like, Drosophila) | ||||
| YTHDC1 | YTH domain containing 1 | ||||
| ZNF294 | zinc finger protein 294 | ||||
| ZNF70 | zinc finger protein 70 |