isomiR Target Prediction
| isomiR-specific | GeneTitle | Shared | GeneTitle | Canonical miRNA-specific | GeneTitle |
|---|---|---|---|---|---|
| APH1A | anterior pharynx defective 1 homolog A (C. elegans) | HSPA12A | heat shock 70kDa protein 12A | SORT1 | sortilin 1 |
| ATP6V0B | ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b | CCDC49 | coiled-coil domain containing 49 | HABP4 | hyaluronan binding protein 4 |
| CAPNS1 | calpain, small subunit 1 | PAX8 | paired box 8 | RFC1 | replication factor C (activator 1) 1, 145kDa |
| EMR4P | egf-like module containing, mucin-like, hormone receptor-like 4 pseudogene | SPRY3 | sprouty homolog 3 (Drosophila) | EPN3 | epsin 3 |
| FAM57B | family with sequence similarity 57, member B | CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | CNBP | CCHC-type zinc finger, nucleic acid binding protein |
| FEM1C | fem-1 homolog c (C. elegans) | GALNT17 | polypeptide N-acetylgalactosaminyltransferase 17 | FCHO2 | FCH domain only 2 |
| GMFB | glia maturation factor, beta | PIP4K2C | phosphatidylinositol-5-phosphate 4-kinase, type II, gamma | RPA1 | replication protein A1, 70kDa |
| IRF1 | interferon regulatory factor 1 | ADCY6 | adenylate cyclase 6 | DHCR24 | 24-dehydrocholesterol reductase |
| KIF3B | kinesin family member 3B | CDIPT | CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) | OLFM3 | olfactomedin 3 |
| LAMP2 | lysosomal-associated membrane protein 2 | LOC606495 | hypothetical protein LOC606495 | GPR3 | G protein-coupled receptor 3 |
| LHFPL2 | lipoma HMGIC fusion partner-like 2 | LIMD2 | LIM domain containing 2 | SMAD1 | SMAD family member 1 |
| LL22NC03-75B3.6 | KIAA1644 protein | KCNC1 | potassium voltage-gated channel, Shaw-related subfamily, member 1 | LAT2 | linker for activation of T cells family, member 2 |
| LOC203547 | hypothetical protein LOC203547 | MTMR3 | myotubularin related protein 3 | TUB | tubby homolog (mouse) |
| LRCH4 | leucine-rich repeats and calponin homology (CH) domain containing 4 | NBL1 | neuroblastoma, suppression of tumorigenicity 1 | C12orf4 | chromosome 12 open reading frame 4 |
| MFHAS1 | malignant fibrous histiocytoma amplified sequence 1 | KIF1B | kinesin family member 1B | RAB3B | RAB3B, member RAS oncogene family |
| MRPL17 | mitochondrial ribosomal protein L17 | GMEB2 | glucocorticoid modulatory element binding protein 2 | ||
| NCAPG | non-SMC condensin I complex, subunit G | CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 | ||
| NKX2-3 | NK2 transcription factor related, locus 3 (Drosophila) | ADAMTS4 | ADAM metallopeptidase with thrombospondin type 1 motif, 4 | ||
| NPL | N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) | SLC4A5 | solute carrier family 4, sodium bicarbonate cotransporter, member 5 | ||
| OTX2 | orthodenticle homeobox 2 | RUNX3 | runt-related transcription factor 3 | ||
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 | USP54 | ubiquitin specific peptidase 54 | ||
| PA2G4 | proliferation-associated 2G4, 38kDa | C1orf144 | chromosome 1 open reading frame 144 | ||
| PARVA | parvin, alpha | ZNF598 | zinc finger protein 598 | ||
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 | IL1F10 | interleukin 1 family, member 10 (theta) | ||
| PJA2 | praja 2, RING-H2 motif containing | VAPB | VAMP (vesicle-associated membrane protein)-associated protein B and C | ||
| PTOV1 | prostate tumor overexpressed gene 1 | USP15 | ubiquitin specific peptidase 15 | ||
| RIPK3 | receptor-interacting serine-threonine kinase 3 | RAB39B | RAB39B, member RAS oncogene family | ||
| RND2 | Rho family GTPase 2 | C8orf44 | chromosome 8 open reading frame 44 | ||
| SHB | Src homology 2 domain containing adaptor protein B | FZD5 | frizzled homolog 5 (Drosophila) | ||
| SLC9A1 | solute carrier family 9 (sodium/hydrogen exchanger), member 1 (antiporter, Na+/H+, amiloride sensitive) | GABRA4 | gamma-aminobutyric acid (GABA) A receptor, alpha 4 | ||
| SMAD3 | SMAD family member 3 | SLC7A6 | solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 | ||
| TAF8 | TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa | SORBS1 | sorbin and SH3 domain containing 1 | ||
| TAOK1 | TAO kinase 1 | KITLG | KIT ligand | ||
| UBE2Z | ubiquitin-conjugating enzyme E2Z | LOC162073 | hypothetical protein LOC162073 | ||
| VAPA | VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa | MLL3 | myeloid/lymphoid or mixed-lineage leukemia 3 | ||
| ZCCHC14 | zinc finger, CCHC domain containing 14 | KIAA1539 | KIAA1539 | ||
| BCL2 | B-cell CLL/lymphoma 2 | BSN | bassoon (presynaptic cytomatrix protein) | ||
| BCL2L2 | BCL2-like 2 | PGAP1 | post-GPI attachment to proteins 1 | ||
| C10orf81 | chromosome 10 open reading frame 81 | EDEM3 | ER degradation enhancer, mannosidase alpha-like 3 | ||
| C16orf45 | chromosome 16 open reading frame 45 | TOB1 | transducer of ERBB2, 1 | ||
| CSNK1G1 | casein kinase 1, gamma 1 | CAPN6 | calpain 6 | ||
| CTSC | cathepsin C | LFNG | LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase | ||
| GAP43 | growth associated protein 43 | MMP16 | matrix metallopeptidase 16 (membrane-inserted) | ||
| HNRNPK | heterogeneous nuclear ribonucleoprotein K | EPS8 | epidermal growth factor receptor pathway substrate 8 | ||
| KIAA1787 | KIAA1787 protein | RC3H1 | ring finger and CCCH-type zinc finger domains 1 | ||
| LPGAT1 | lysophosphatidylglycerol acyltransferase 1 | C17orf39 | chromosome 17 open reading frame 39 | ||
| LPIN2 | lipin 2 | TRIM25 | tripartite motif-containing 25 | ||
| NRGN | neurogranin (protein kinase C substrate, RC3) | CCDC4 | coiled-coil domain containing 4 | ||
| PEG10 | paternally expressed 10 | HOXA3 | homeobox A3 | ||
| RRP15 | ribosomal RNA processing 15 homolog (S. cerevisiae) | MON2 | MON2 homolog (S. cerevisiae) | ||
| TBL1X | transducin (beta)-like 1X-linked | ZNF236 | zinc finger protein 236 | ||
| ZNF449 | zinc finger protein 449 | ZFYVE20 | zinc finger, FYVE domain containing 20 | ||
| ANKRD11 | ankyrin repeat domain 11 | FAM178A | family with sequence similarity 178, member A | ||
| ARHGAP28 | Rho GTPase activating protein 28 | MED8 | mediator complex subunit 8 | ||
| ARSG | arylsulfatase G | FRMD6 | FERM domain containing 6 | ||
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | RAD51L1 | RAD51-like 1 (S. cerevisiae) | ||
| C6orf165 | chromosome 6 open reading frame 165 | SSBP2 | single-stranded DNA binding protein 2 | ||
| CDC42EP2 | CDC42 effector protein (Rho GTPase binding) 2 | PIP3-E | phosphoinositide-binding protein PIP3-E | ||
| DNAJC14 | DnaJ (Hsp40) homolog, subfamily C, member 14 | HNRNPA3 | heterogeneous nuclear ribonucleoprotein A3 | ||
| FAM125B | family with sequence similarity 125, member B | TRPS1 | trichorhinophalangeal syndrome I | ||
| FAM168A | family with sequence similarity 168, member A | ADIG | adipogenin | ||
| FAM5B | family with sequence similarity 5, member B | CLOCK | clock homolog (mouse) | ||
| FLJ45803 | FLJ45803 protein | SLC11A2 | solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 | ||
| GTF3C2 | general transcription factor IIIC, polypeptide 2, beta 110kDa | SRL | sarcalumenin | ||
| HOXC6 | homeobox C6 | C7orf60 | chromosome 7 open reading frame 60 | ||
| HTR4 | 5-hydroxytryptamine (serotonin) receptor 4 | RETSAT | retinol saturase (all-trans-retinol 13,14-reductase) | ||
| RANBP6 | RAN binding protein 6 | MAGIX | MAGI family member, X-linked | ||
| SMAD6 | SMAD family member 6 | TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | ||
| THSD7B | thrombospondin, type I, domain containing 7B | RXRB | retinoid X receptor, beta | ||
| TRPV4 | transient receptor potential cation channel, subfamily V, member 4 | KRI1 | KRI1 homolog (S. cerevisiae) | ||
| ZFAND3 | zinc finger, AN1-type domain 3 | JPH4 | junctophilin 4 | ||
| ZMAT2 | zinc finger, matrin type 2 | ARSB | arylsulfatase B | ||
| ZNF618 | zinc finger protein 618 | SEPT11 | septin 11 | ||
| BBC3 | BCL2 binding component 3 | ||||
| FBXW11 | F-box and WD repeat domain containing 11 | ||||
| IDS | iduronate 2-sulfatase (Hunter syndrome) | ||||
| APLN | apelin | ||||