isomiR Target Prediction
| isomiR-specific | GeneTitle | Shared | GeneTitle | Canonical miRNA-specific | GeneTitle |
|---|---|---|---|---|---|
| BMPR1B | bone morphogenetic protein receptor, type IB | C8orf44 | chromosome 8 open reading frame 44 | HSPA12A | heat shock 70kDa protein 12A |
| C11orf58 | chromosome 11 open reading frame 58 | SORBS1 | sorbin and SH3 domain containing 1 | SORT1 | sortilin 1 |
| CALM1 | calmodulin 1 (phosphorylase kinase, delta) | CCDC4 | coiled-coil domain containing 4 | HABP4 | hyaluronan binding protein 4 |
| COG6 | component of oligomeric golgi complex 6 | RFC1 | replication factor C (activator 1) 1, 145kDa | ||
| DBR1 | debranching enzyme homolog 1 (S. cerevisiae) | EPN3 | epsin 3 | ||
| DDEFL1 | development and differentiation enhancing factor-like 1 | CNBP | CCHC-type zinc finger, nucleic acid binding protein | ||
| DDX24 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 | FCHO2 | FCH domain only 2 | ||
| DYRK2 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 | RPA1 | replication protein A1, 70kDa | ||
| FLRT3 | fibronectin leucine rich transmembrane protein 3 | DHCR24 | 24-dehydrocholesterol reductase | ||
| GNL3L | guanine nucleotide binding protein-like 3 (nucleolar)-like | OLFM3 | olfactomedin 3 | ||
| HDGFRP3 | hepatoma-derived growth factor, related protein 3 | GPR3 | G protein-coupled receptor 3 | ||
| IGF1R | insulin-like growth factor 1 receptor | CCDC49 | coiled-coil domain containing 49 | ||
| MOBP | myelin-associated oligodendrocyte basic protein | SMAD1 | SMAD family member 1 | ||
| NR4A2 | nuclear receptor subfamily 4, group A, member 2 | LAT2 | linker for activation of T cells family, member 2 | ||
| PAAF1 | proteasomal ATPase-associated factor 1 | TUB | tubby homolog (mouse) | ||
| PDIK1L | PDLIM1 interacting kinase 1 like | C12orf4 | chromosome 12 open reading frame 4 | ||
| PRKAA2 | protein kinase, AMP-activated, alpha 2 catalytic subunit | RAB3B | RAB3B, member RAS oncogene family | ||
| RUNX1T1 | runt-related transcription factor 1; translocated to, 1 (cyclin D-related) | GMEB2 | glucocorticoid modulatory element binding protein 2 | ||
| SDAD1 | SDA1 domain containing 1 | CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 | ||
| SFRS12 | splicing factor, arginine/serine-rich 12 | ADAMTS4 | ADAM metallopeptidase with thrombospondin type 1 motif, 4 | ||
| SLC4A8 | solute carrier family 4, sodium bicarbonate cotransporter, member 8 | SLC4A5 | solute carrier family 4, sodium bicarbonate cotransporter, member 5 | ||
| STX6 | syntaxin 6 | RUNX3 | runt-related transcription factor 3 | ||
| TMEM215 | transmembrane protein 215 | USP54 | ubiquitin specific peptidase 54 | ||
| TNKS2 | tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 | PAX8 | paired box 8 | ||
| TXLNB | taxilin beta | C1orf144 | chromosome 1 open reading frame 144 | ||
| TXNDC5 | thioredoxin domain containing 5 | ZNF598 | zinc finger protein 598 | ||
| VCL | vinculin | IL1F10 | interleukin 1 family, member 10 (theta) | ||
| ZAK | sterile alpha motif and leucine zipper containing kinase AZK | SPRY3 | sprouty homolog 3 (Drosophila) | ||
| ZNF410 | zinc finger protein 410 | VAPB | VAMP (vesicle-associated membrane protein)-associated protein B and C | ||
| ZNF512 | zinc finger protein 512 | CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | ||
| ATRN | attractin | USP15 | ubiquitin specific peptidase 15 | ||
| C1orf151 | chromosome 1 open reading frame 151 | RAB39B | RAB39B, member RAS oncogene family | ||
| CTNND1 | catenin (cadherin-associated protein), delta 1 | FZD5 | frizzled homolog 5 (Drosophila) | ||
| LIN7C | lin-7 homolog C (C. elegans) | GABRA4 | gamma-aminobutyric acid (GABA) A receptor, alpha 4 | ||
| MET | met proto-oncogene (hepatocyte growth factor receptor) | SLC7A6 | solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 | ||
| NIPBL | Nipped-B homolog (Drosophila) | KITLG | KIT ligand | ||
| NOVA1 | neuro-oncological ventral antigen 1 | LOC162073 | hypothetical protein LOC162073 | ||
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | MLL3 | myeloid/lymphoid or mixed-lineage leukemia 3 | ||
| PDZD2 | PDZ domain containing 2 | KIAA1539 | KIAA1539 | ||
| VPS26A | vacuolar protein sorting 26 homolog A (S. pombe) | BSN | bassoon (presynaptic cytomatrix protein) | ||
| ZDHHC8 | zinc finger, DHHC-type containing 8 | PGAP1 | post-GPI attachment to proteins 1 | ||
| BMPR2 | bone morphogenetic protein receptor, type II (serine/threonine kinase) | EDEM3 | ER degradation enhancer, mannosidase alpha-like 3 | ||
| C1orf25 | chromosome 1 open reading frame 25 | TOB1 | transducer of ERBB2, 1 | ||
| C1orf94 | chromosome 1 open reading frame 94 | CAPN6 | calpain 6 | ||
| CHL1 | cell adhesion molecule with homology to L1CAM (close homolog of L1) | LFNG | LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase | ||
| CLIC4 | chloride intracellular channel 4 | MMP16 | matrix metallopeptidase 16 (membrane-inserted) | ||
| COBL | cordon-bleu homolog (mouse) | EPS8 | epidermal growth factor receptor pathway substrate 8 | ||
| DCLK1 | doublecortin-like kinase 1 | GALNT17 | polypeptide N-acetylgalactosaminyltransferase 17 | ||
| DCX | doublecortex; lissencephaly, X-linked (doublecortin) | RC3H1 | ring finger and CCCH-type zinc finger domains 1 | ||
| DMD | dystrophin (muscular dystrophy, Duchenne and Becker types) | C17orf39 | chromosome 17 open reading frame 39 | ||
| ERLIN2 | ER lipid raft associated 2 | PIP4K2C | phosphatidylinositol-5-phosphate 4-kinase, type II, gamma | ||
| FUT9 | fucosyltransferase 9 (alpha (1,3) fucosyltransferase) | TRIM25 | tripartite motif-containing 25 | ||
| GPR126 | G protein-coupled receptor 126 | HOXA3 | homeobox A3 | ||
| GRPEL2 | GrpE-like 2, mitochondrial (E. coli) | MON2 | MON2 homolog (S. cerevisiae) | ||
| HLF | hepatic leukemia factor | ZNF236 | zinc finger protein 236 | ||
| MBNL1 | muscleblind-like (Drosophila) | ZFYVE20 | zinc finger, FYVE domain containing 20 | ||
| MRE11A | MRE11 meiotic recombination 11 homolog A (S. cerevisiae) | FAM178A | family with sequence similarity 178, member A | ||
| PAFAH1B1 | platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa | MED8 | mediator complex subunit 8 | ||
| PTPRK | protein tyrosine phosphatase, receptor type, K | FRMD6 | FERM domain containing 6 | ||
| RAB3GAP2 | RAB3 GTPase activating protein subunit 2 (non-catalytic) | RAD51L1 | RAD51-like 1 (S. cerevisiae) | ||
| RY1 | putative nucleic acid binding protein RY-1 | SSBP2 | single-stranded DNA binding protein 2 | ||
| 42258 | septin 11 | PIP3-E | phosphoinositide-binding protein PIP3-E | ||
| SFPQ | splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated) | HNRNPA3 | heterogeneous nuclear ribonucleoprotein A3 | ||
| SLC25A38 | solute carrier family 25, member 38 | ADCY6 | adenylate cyclase 6 | ||
| SOX11 | SRY (sex determining region Y)-box 11 | TRPS1 | trichorhinophalangeal syndrome I | ||
| SPCS2 | signal peptidase complex subunit 2 homolog (S. cerevisiae) | CDIPT | CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) | ||
| SWAP70 | SWAP-70 protein | ADIG | adipogenin | ||
| WDR68 | WD repeat domain 68 | CLOCK | clock homolog (mouse) | ||
| ZEB2 | zinc finger E-box binding homeobox 2 | LOC606495 | hypothetical protein LOC606495 | ||
| SLC11A2 | solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 | ||||
| SRL | sarcalumenin | ||||
| C7orf60 | chromosome 7 open reading frame 60 | ||||
| RETSAT | retinol saturase (all-trans-retinol 13,14-reductase) | ||||
| MAGIX | MAGI family member, X-linked | ||||
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | ||||
| RXRB | retinoid X receptor, beta | ||||
| LIMD2 | LIM domain containing 2 | ||||
| KRI1 | KRI1 homolog (S. cerevisiae) | ||||
| JPH4 | junctophilin 4 | ||||
| KCNC1 | potassium voltage-gated channel, Shaw-related subfamily, member 1 | ||||
| ARSB | arylsulfatase B | ||||
| MTMR3 | myotubularin related protein 3 | ||||
| SEPT11 | septin 11 | ||||
| BBC3 | BCL2 binding component 3 | ||||
| FBXW11 | F-box and WD repeat domain containing 11 | ||||
| NBL1 | neuroblastoma, suppression of tumorigenicity 1 | ||||
| IDS | iduronate 2-sulfatase (Hunter syndrome) | ||||
| APLN | apelin | ||||
| KIF1B | kinesin family member 1B | ||||