isomiR Target Prediction
| isomiR-specific | GeneTitle | Shared | GeneTitle | Canonical miRNA-specific | GeneTitle |
|---|---|---|---|---|---|
| ASH1L | ash1 (absent, small, or homeotic)-like (Drosophila) | PTGER3 | prostaglandin E receptor 3 (subtype EP3) | UPP2 | uridine phosphorylase 2 |
| BIVM | basic, immunoglobulin-like variable motif containing | MAF | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | ZFAND5 | zinc finger, AN1-type domain 5 |
| CHP | calcium binding protein P22 | ZIC1 | Zic family member 1 (odd-paired homolog, Drosophila) | RYBP | RING1 and YY1 binding protein |
| DLL4 | delta-like 4 (Drosophila) | MANEA | mannosidase, endo-alpha | ||
| EBF3 | early B-cell factor 3 | SFRS10 | splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila) | ||
| ERC2 | ELKS/RAB6-interacting/CAST family member 2 | CHL1 | cell adhesion molecule with homology to L1CAM (close homolog of L1) | ||
| HNRNPA2B1 | heterogeneous nuclear ribonucleoprotein A2/B1 | PITPNA | phosphatidylinositol transfer protein, alpha | ||
| LUC7L2 | LUC7-like 2 (S. cerevisiae) | CLASP2 | cytoplasmic linker associated protein 2 | ||
| MID1 | midline 1 (Opitz/BBB syndrome) | YTHDF3 | YTH domain family, member 3 | ||
| PAP2D | phosphatidic acid phosphatase type 2 | CASD1 | CAS1 domain containing 1 | ||
| PIK3R1 | phosphoinositide-3-kinase, regulatory subunit 1 (alpha) | PFN2 | profilin 2 | ||
| RNF11 | ring finger protein 11 | CYP7B1 | cytochrome P450, family 7, subfamily B, polypeptide 1 | ||
| RTKN2 | rhotekin 2 | ZNF785 | zinc finger protein 785 | ||
| UHMK1 | U2AF homology motif (UHM) kinase 1 | ZFPM2 | zinc finger protein, multitype 2 | ||
| ZC3H7B | zinc finger CCCH-type containing 7B | PURB | purine-rich element binding protein B | ||
| AFF3 | AF4/FMR2 family, member 3 | NPAL2 | NIPA-like domain containing 2 | ||
| AKAP6 | A kinase (PRKA) anchor protein 6 | DLC1 | deleted in liver cancer 1 | ||
| C18orf1 | chromosome 18 open reading frame 1 | CCDC67 | coiled-coil domain containing 67 | ||
| CALB1 | calbindin 1, 28kDa | FXR1 | fragile X mental retardation, autosomal homolog 1 | ||
| CPEB4 | cytoplasmic polyadenylation element binding protein 4 | AKT3 | v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) | ||
| DACH1 | dachshund homolog 1 (Drosophila) | C6orf106 | chromosome 6 open reading frame 106 | ||
| EPN2 | epsin 2 | SLC39A10 | solute carrier family 39 (zinc transporter), member 10 | ||
| FOXF2 | forkhead box F2 | ENPP1 | ectonucleotide pyrophosphatase/phosphodiesterase 1 | ||
| HK2 | hexokinase 2 | KLF12 | Kruppel-like factor 12 | ||
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | PPFIA1 | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 | ||
| KIF5C | kinesin family member 5C | PPP1R16B | protein phosphatase 1, regulatory (inhibitor) subunit 16B | ||
| MBNL1 | muscleblind-like (Drosophila) | FAM104A | family with sequence similarity 104, member A | ||
| PLEKHM1 | pleckstrin homology domain containing, family M (with RUN domain) member 1 | PKN2 | protein kinase N2 | ||
| RAN | RAN, member RAS oncogene family | TXNDC1 | thioredoxin domain containing 1 | ||
| SEC62 | SEC62 homolog (S. cerevisiae) | C6orf91 | chromosome 6 open reading frame 91 | ||
| TCF4 | transcription factor 4 | RC3H1 | ring finger and CCCH-type zinc finger domains 1 | ||
| TMEM201 | transmembrane protein 201 | HIF1A | hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | ||
| USP7 | ubiquitin specific peptidase 7 (herpes virus-associated) | LEPR | leptin receptor | ||
| ZCCHC14 | zinc finger, CCHC domain containing 14 | TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | ||
| ZNF664 | zinc finger protein 664 | CALD1 | caldesmon 1 | ||
| ZNRF1 | zinc and ring finger 1 | PRKAA2 | protein kinase, AMP-activated, alpha 2 catalytic subunit | ||
| AAK1 | AP2 associated kinase 1 | CCDC3 | coiled-coil domain containing 3 | ||
| ATXN1 | ataxin 1 | BAAT | bile acid Coenzyme A: amino acid N-acyltransferase (glycine N-choloyltransferase) | ||
| BAT2D1 | BAT2 domain containing 1 | CALN1 | calneuron 1 | ||
| BHLHB3 | basic helix-loop-helix domain containing, class B, 3 | PTPRS | protein tyrosine phosphatase, receptor type, S | ||
| CDH6 | cadherin 6, type 2, K-cadherin (fetal kidney) | CUL3 | cullin 3 | ||
| DPP8 | dipeptidyl-peptidase 8 | RANBP17 | RAN binding protein 17 | ||
| EMP1 | epithelial membrane protein 1 | PLXNA4 | plexin A4 | ||
| FOXE1 | forkhead box E1 (thyroid transcription factor 2) | ZBTB38 | zinc finger and BTB domain containing 38 | ||
| GPR85 | G protein-coupled receptor 85 | FAM5C | family with sequence similarity 5, member C | ||
| IGF1R | insulin-like growth factor 1 receptor | EIF2AK3 | eukaryotic translation initiation factor 2-alpha kinase 3 | ||
| JARID1A | jumonji, AT rich interactive domain 1A | C5orf41 | chromosome 5 open reading frame 41 | ||
| LMO3 | LIM domain only 3 (rhombotin-like 2) | RPS6KA3 | ribosomal protein S6 kinase, 90kDa, polypeptide 3 | ||
| LMO4 | LIM domain only 4 | EFNA3 | ephrin-A3 | ||
| LYRM2 | LYR motif containing 2 | WDR40A | WD repeat domain 40A | ||
| NEBL | nebulette | ELMO1 | engulfment and cell motility 1 | ||
| PAPOLB | poly(A) polymerase beta (testis specific) | PSME3 | proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) | ||
| PRICKLE2 | prickle homolog 2 (Drosophila) | ST8SIA2 | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 | ||
| PRKD3 | protein kinase D3 | POU4F1 | POU class 4 homeobox 1 | ||
| PRR14 | proline rich 14 | ADRB2 | adrenergic, beta-2-, receptor, surface | ||
| RASGEF1A | RasGEF domain family, member 1A | FBXW11 | F-box and WD repeat domain containing 11 | ||
| RNF216 | ring finger protein 216 | CYLD | cylindromatosis (turban tumor syndrome) | ||
| SLC23A2 | solute carrier family 23 (nucleobase transporters), member 2 | LRRTM2 | leucine rich repeat transmembrane neuronal 2 | ||
| SPTBN1 | spectrin, beta, non-erythrocytic 1 | WHSC1L1 | Wolf-Hirschhorn syndrome candidate 1-like 1 | ||
| TCERG1 | transcription elongation regulator 1 | PHC1 | polyhomeotic homolog 1 (Drosophila) | ||
| TRIM2 | tripartite motif-containing 2 | TP63 | tumor protein p63 | ||
| TRPS1 | trichorhinophalangeal syndrome I | EFNB2 | ephrin-B2 | ||
| UNKL | unkempt homolog (Drosophila)-like | ZNF292 | zinc finger protein 292 | ||
| ZBTB33 | zinc finger and BTB domain containing 33 | NAV3 | neuron navigator 3 | ||
| ZC3H12C | zinc finger CCCH-type containing 12C | KSR2 | kinase suppressor of ras 2 | ||
| UBE2NL | ubiquitin-conjugating enzyme E2N-like | ||||
| NUFIP2 | nuclear fragile X mental retardation protein interacting protein 2 | ||||
| SP3 | Sp3 transcription factor | ||||
| ZKSCAN1 | zinc finger with KRAB and SCAN domains 1 | ||||
| IQSEC1 | IQ motif and Sec7 domain 1 | ||||
| INSR | insulin receptor | ||||
| ZNF362 | zinc finger protein 362 |