isomiR Target Prediction
| isomiR-specific | GeneTitle | Shared | GeneTitle | Canonical miRNA-specific | GeneTitle |
|---|---|---|---|---|---|
| ANTXR1 | anthrax toxin receptor 1 | ERBB4 | v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) | TRAF6 | TNF receptor-associated factor 6 |
| ARMC1 | armadillo repeat containing 1 | EIF4G2 | eukaryotic translation initiation factor 4 gamma, 2 | IRAK1 | interleukin-1 receptor-associated kinase 1 |
| ATP11C | ATPase, class VI, type 11C | MED1 | mediator complex subunit 1 | ZBTB2 | zinc finger and BTB domain containing 2 |
| ATP1B2 | ATPase, Na+/K+ transporting, beta 2 polypeptide | USP47 | ubiquitin specific peptidase 47 | IGSF1 | immunoglobulin superfamily, member 1 |
| C19orf50 | chromosome 19 open reading frame 50 | PHOX2B | paired-like homeobox 2b | NOVA1 | neuro-oncological ventral antigen 1 |
| C6orf106 | chromosome 6 open reading frame 106 | ST7L | suppression of tumorigenicity 7 like | ||
| CCDC138 | coiled-coil domain containing 138 | CCBP2 | chemokine binding protein 2 | ||
| CD28 | CD28 molecule | TDRKH | tudor and KH domain containing | ||
| CENPP | centromere protein P | ZNRF3 | zinc and ring finger 3 | ||
| COL12A1 | collagen, type XII, alpha 1 | SEC23IP | SEC23 interacting protein | ||
| CYP7A1 | cytochrome P450, family 7, subfamily A, polypeptide 1 | NUMB | numb homolog (Drosophila) | ||
| 42339 | deleted in esophageal cancer 1 | WDR40A | WD repeat domain 40A | ||
| DIP2B | DIP2 disco-interacting protein 2 homolog B (Drosophila) | LRRC15 | leucine rich repeat containing 15 | ||
| EDEM3 | ER degradation enhancer, mannosidase alpha-like 3 | BCORL1 | BCL6 co-repressor-like 1 | ||
| EID1 | EP300 interacting inhibitor of differentiation 1 | SIAH2 | seven in absentia homolog 2 (Drosophila) | ||
| FBXW7 | F-box and WD repeat domain containing 7 | CD80 | CD80 molecule | ||
| FGD5 | FYVE, RhoGEF and PH domain containing 5 | LRP2 | low density lipoprotein-related protein 2 | ||
| FOXG1 | forkhead box G1 | LFNG | LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase | ||
| GNA11 | guanine nucleotide binding protein (G protein), alpha 11 (Gq class) | NRAS | neuroblastoma RAS viral (v-ras) oncogene homolog | ||
| MAF | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | HNRNPD | heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) | ||
| MED13 | mediator complex subunit 13 | SORT1 | sortilin 1 | ||
| MTDH | metadherin | KLF7 | Kruppel-like factor 7 (ubiquitous) | ||
| MYEOV | myeloma overexpressed gene (in a subset of t(11;14) positive multiple myelomas) | SMAD4 | SMAD family member 4 | ||
| NFIB | nuclear factor I/B | ABL2 | v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) | ||
| NPLOC4 | nuclear protein localization 4 homolog (S. cerevisiae) | ZNF532 | zinc finger protein 532 | ||
| OPA1 | optic atrophy 1 (autosomal dominant) | USP3 | ubiquitin specific peptidase 3 | ||
| PHF17 | PHD finger protein 17 | FBXW2 | F-box and WD repeat domain containing 2 | ||
| PLAGL1 | pleiomorphic adenoma gene-like 1 | DNAL1 | dynein, axonemal, light chain 1 | ||
| PRKAA2 | protein kinase, AMP-activated, alpha 2 catalytic subunit | GOSR1 | golgi SNAP receptor complex member 1 | ||
| RNMT | RNA (guanine-7-) methyltransferase | ATG12 | ATG12 autophagy related 12 homolog (S. cerevisiae) | ||
| SEC62 | SEC62 homolog (S. cerevisiae) | SLC10A3 | solute carrier family 10 (sodium/bile acid cotransporter family), member 3 | ||
| SLC37A4 | solute carrier family 37 (glucose-6-phosphate transporter), member 4 | ZNF512B | zinc finger protein 512B | ||
| SMAP1 | stromal membrane-associated GTPase-activating protein 1 | UBXD8 | UBX domain containing 8 | ||
| SOCS4 | suppressor of cytokine signaling 4 | C12orf36 | chromosome 12 open reading frame 36 | ||
| SPACA1 | sperm acrosome associated 1 | STRBP | spermatid perinuclear RNA binding protein | ||
| STAG1 | stromal antigen 1 | FBXL10 | F-box and leucine-rich repeat protein 10 | ||
| STIL | SCL/TAL1 interrupting locus | CARD10 | caspase recruitment domain family, member 10 | ||
| TMCO7 | transmembrane and coiled-coil domains 7 | RABGAP1 | RAB GTPase activating protein 1 | ||
| TNRC6B | trinucleotide repeat containing 6B | GRID1 | glutamate receptor, ionotropic, delta 1 | ||
| UBA3 | ubiquitin-like modifier activating enzyme 3 | UHRF1 | ubiquitin-like, containing PHD and RING finger domains, 1 | ||
| UBE2G1 | ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) | SYT1 | synaptotagmin I | ||
| ZBTB10 | zinc finger and BTB domain containing 10 | SLC2A3 | solute carrier family 2 (facilitated glucose transporter), member 3 | ||
| ZBTB8 | zinc finger and BTB domain containing 8 | IER5L | immediate early response 5-like | ||
| ZFAND6 | zinc finger, AN1-type domain 6 | FAM26E | family with sequence similarity 26, member E | ||
| ZNF275 | zinc finger protein 275 | WWC2 | WW and C2 domain containing 2 | ||
| FZD4 | frizzled homolog 4 (Drosophila) | APPL1 | adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 | ||
| AMOTL2 | angiomotin like 2 | RFTN2 | raftlin family member 2 | ||
| BZW1 | basic leucine zipper and W2 domains 1 | DNPEP | aspartyl aminopeptidase | ||
| CTGF | connective tissue growth factor | DLGAP2 | discs, large (Drosophila) homolog-associated protein 2 | ||
| EBF3 | early B-cell factor 3 | CCDC6 | coiled-coil domain containing 6 | ||
| ELAVL1 | ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) | PM20D2 | peptidase M20 domain containing 2 | ||
| HMGCS1 | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) | MYBL1 | v-myb myeloblastosis viral oncogene homolog (avian)-like 1 | ||
| HNMT | histamine N-methyltransferase | SRrp35 | serine-arginine repressor protein (35 kDa) | ||
| KIAA1211 | KIAA1211 protein | SH3TC2 | SH3 domain and tetratricopeptide repeats 2 | ||
| MEIS1 | Meis homeobox 1 | TCF21 | transcription factor 21 | ||
| NAV1 | neuron navigator 1 | CASK | calcium/calmodulin-dependent serine protein kinase (MAGUK family) | ||
| NLK | nemo-like kinase | GALNT10 | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) | ||
| NPNT | nephronectin | RNASEL | ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) | ||
| OLFM1 | olfactomedin 1 | KIF24 | kinesin family member 24 | ||
| SCD5 | stearoyl-CoA desaturase 5 | AP3M2 | adaptor-related protein complex 3, mu 2 subunit | ||
| SCG3 | secretogranin III | NF2 | neurofibromin 2 (merlin) | ||
| ADO | 2-aminoethanethiol (cysteamine) dioxygenase | C5orf46 | chromosome 5 open reading frame 46 | ||
| ARHGAP24 | Rho GTPase activating protein 24 | ZNF148 | zinc finger protein 148 | ||
| C1orf151 | chromosome 1 open reading frame 151 | PPM1M | protein phosphatase 1M (PP2C domain containing) | ||
| CAMSAP1L1 | calmodulin regulated spectrin-associated protein 1-like 1 | LRRTM2 | leucine rich repeat transmembrane neuronal 2 | ||
| CCDC97 | coiled-coil domain containing 97 | RUNX1T1 | runt-related transcription factor 1; translocated to, 1 (cyclin D-related) | ||
| CNR1 | cannabinoid receptor 1 (brain) | BIVM | basic, immunoglobulin-like variable motif containing | ||
| EEA1 | early endosome antigen 1 | PSMD3 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 | ||
| GTDC1 | glycosyltransferase-like domain containing 1 | SCN3B | sodium channel, voltage-gated, type III, beta | ||
| HLCS | holocarboxylase synthetase (biotin-(proprionyl-Coenzyme A-carboxylase (ATP-hydrolysing)) ligase) | MMP16 | matrix metallopeptidase 16 (membrane-inserted) | ||
| HOXB3 | homeobox B3 | SNX21 | sorting nexin family member 21 | ||
| HRB | HIV-1 Rev binding protein | PTGFRN | prostaglandin F2 receptor negative regulator | ||
| KRAS | v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog | ST8SIA4 | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 | ||
| LIFR | leukemia inhibitory factor receptor alpha | TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | ||
| MAGT1 | magnesium transporter 1 | STRA13 | stimulated by retinoic acid 13 homolog (mouse) | ||
| MBTD1 | mbt domain containing 1 | PCBP4 | poly(rC) binding protein 4 | ||
| MYT1L | myelin transcription factor 1-like | JAZF1 | JAZF zinc finger 1 | ||
| PAPOLB | poly(A) polymerase beta (testis specific) | KCMF1 | potassium channel modulatory factor 1 | ||
| RHOBTB1 | Rho-related BTB domain containing 1 | PPP1R11 | protein phosphatase 1, regulatory (inhibitor) subunit 11 | ||
| SLC12A1 | solute carrier family 12 (sodium/potassium/chloride transporters), member 1 | ROBO1 | roundabout, axon guidance receptor, homolog 1 (Drosophila) | ||
| SLC12A5 | solute carrier family 12, (potassium-chloride transporter) member 5 | SP8 | Sp8 transcription factor | ||
| SMAD7 | SMAD family member 7 | RCSD1 | RCSD domain containing 1 | ||
| USH2A | Usher syndrome 2A (autosomal recessive, mild) | BAG1 | BCL2-associated athanogene | ||
| VEGFA | vascular endothelial growth factor A | FLOT2 | flotillin 2 | ||
| VTI1A | vesicle transport through interaction with t-SNAREs homolog 1A (yeast) | TEX261 | testis expressed 261 | ||
| ZNF215 | zinc finger protein 215 | FRYL | FRY-like | ||
| ZNF329 | zinc finger protein 329 | BTG2 | BTG family, member 2 | ||
| KCTD15 | potassium channel tetramerisation domain containing 15 | ||||
| BNC1 | basonuclin 1 | ||||
| CUGBP2 | CUG triplet repeat, RNA binding protein 2 | ||||
| MYT1 | myelin transcription factor 1 | ||||
| DGKG | diacylglycerol kinase, gamma 90kDa | ||||
| KPNA6 | karyopherin alpha 6 (importin alpha 7) | ||||
| CCDC4 | coiled-coil domain containing 4 | ||||
| WASF2 | WAS protein family, member 2 | ||||
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | ||||
| GRSF1 | G-rich RNA sequence binding factor 1 | ||||
| EDNRB | endothelin receptor type B | ||||
| SYN2 | synapsin II | ||||
| TAF9B | TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa | ||||
| ZFYVE1 | zinc finger, FYVE domain containing 1 | ||||
| CNTFR | ciliary neurotrophic factor receptor | ||||
| TTPAL | tocopherol (alpha) transfer protein-like | ||||
| KIAA1853 | KIAA1853 | ||||
| CDC42BPA | CDC42 binding protein kinase alpha (DMPK-like) | ||||
| ARL8A | ADP-ribosylation factor-like 8A | ||||
| KBTBD3 | kelch repeat and BTB (POZ) domain containing 3 | ||||
| RIMS2 | regulating synaptic membrane exocytosis 2 | ||||
| KCNIP3 | Kv channel interacting protein 3, calsenilin | ||||
| SLITRK3 | SLIT and NTRK-like family, member 3 | ||||
| SEMA3G | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G | ||||
| MLL2 | myeloid/lymphoid or mixed-lineage leukemia 2 | ||||
| STX3 | syntaxin 3 | ||||
| DLGAP1 | discs, large (Drosophila) homolog-associated protein 1 | ||||
| NPAS4 | neuronal PAS domain protein 4 | ||||
| EIF5A2 | eukaryotic translation initiation factor 5A2 | ||||
| MYO6 | myosin VI | ||||
| CSF1R | colony stimulating factor 1 receptor, formerly McDonough feline sarcoma viral (v-fms) oncogene homolog | ||||
| LIN28 | lin-28 homolog (C. elegans) | ||||
| CDON | Cdon homolog (mouse) | ||||
| FAM65B | family with sequence similarity 65, member B | ||||
| NFASC | neurofascin homolog (chicken) | ||||
| PBX2 | pre-B-cell leukemia homeobox 2 | ||||
| JMJD3 | jumonji domain containing 3, histone lysine demethylase | ||||